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Bioinformatics Group @ IPM |
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ASILA |
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ASILA
is written in g++ (MinGW-3.1). It gets M ( number of different haplotypes ) and N ( Number of SNP ) as an input and generate all perfect phylogeny matrices with M different
rows and N columns. As the number of these matrices is exponential, run time of this program is exponential. How To Run The Program : 1-Two
files are available for download (source code ASILA.cpp
and executable code ASILA.exe) 2-Run
ASILA.exe ( First Enter number of different rows(haplotypes)
M and then enter number of different columns(SNP) N) 3-The
results will be available in MresultN.txt For
example if you enter 6 as the number of rows and then enter 8 as the number
of columns the results will be available in 6result8.txt Files Available for download : 3-The
compiler MinGW is available at http:\\www.mingw.org Reference: Hanieh Mirzaei, Sarah Ahmadian, Sepide Mahabadi, Changiz Eslahchi, Mehdi Sadeghi, Hamid Pezeshk, A Constructive Perfect Phylogeny Matrix Algorithm |
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