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School of Computer Science @ IPM
Institute for Studies in Theoretical Physics and Mathematics (IPM)
CLUSMO is written in MATLAB. It gets simulated data and initial parameters as inputs. This algorithm applied for estimating parameters of A Profile Hidden Markov Models.
How To Run The Program :
One file is available for download (CLUSMO.rar:These file contains Matlab code for estimating parameters of A Profile Hidden Markov Models under ML and BMCMC methods) In order to estimate the parameters under ML method run a Matlab script file(run_ml.m). finally, run the Matlab script file (run_bmcmc.m) for estimating the parameters under BMCMC method.
One file is available for download (CLUSMO.rar:These file contains Matlab code for estimating parameters of A Profile Hidden Markov Models under ML and BMCMC methods)
In order to estimate the parameters under ML method run a Matlab script file(run_ml.m).
finally, run the Matlab script file (run_bmcmc.m) for estimating the parameters under BMCMC method.
Bioinformatics Research Group
School of Computer Sciences
Institute for Studies in Theoretical Physics and Mathematics (IPM) All rights reserved.